Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397408.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2095.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22957

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
341--640
156
1.9
156
79
7
340
33
12
14
40
1.84
194--829
328
1.9
327
80
6
723
33
12
13
39
1.82
502--862
170
2.1
170
80
5
397
34
14
11
40
1.82
765--979
106
2.0
106
82
5
256
35
16
15
32
1.90
1986--3591
171
9.4
170
72
10
718
37
11
13
34
1.81
2720--2768
22
2.3
21
86
6
64
53
10
14
22
1.71
2708--3072
172
2.1
173
81
6
420
40
11
12
35
1.79
3855--4162
171
1.8
171
81
2
386
40
14
10
34
1.81
3855--4294
171
2.6
171
78
4
384
39
13
12
34
1.83
4490--4857
171
2.2
171
78
6
381
38
14
13
33
1.84
4535--4857
171
1.9
170
80
5
384
38
14
12
34
1.84
5231--9380
171
24.1
170
69
8
1725
33
13
12
36
1.81
5231--6805
683
2.3
681
85
4
2015
35
13
12
38
1.83
9481--10642
171
6.8
168
80
4
1116
38
12
13
35
1.82
9485--10642
513
2.3
509
80
5
1285
38
12
13
35
1.82
11359--12563
171
7.1
169
72
8
667
34
13
12
37
1.82
12984--15830
171
16.7
171
77
5
2296
35
14
12
37
1.84
16446--16768
170
2.0
161
79
9
346
33
10
13
39
1.79
17704--19882
171
12.8
168
70
6
1002
37
11
12
34
1.79
21423--22054
343
1.9
332
81
3
705
35
12
11
36
1.80
21274--22787
171
8.9
169
74
8
942
37
11
13
35
1.81

Tables:   1

The End!