Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398832.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2115.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3526

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--826
170
4.9
170
79
7
756
38
10
13
37
1.80
1194--2239
171
6.1
171
79
3
1003
37
11
14
37
1.81
1194--2239
341
3.1
341
80
2
1089
37
11
14
37
1.81
2371--3526
171
6.7
171
73
7
800
35
11
14
35
1.82
3023--3052
14
2.1
14
93
0
51
50
6
10
33
1.62

Tables:   1

The End!