Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398880.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2162.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13119

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
274--5041
171
28.0
169
75
7
3244
34
13
12
39
1.82
269--5041
341
14.0
339
78
7
3376
34
13
12
39
1.82
5441--5727
148
2.0
138
83
10
355
35
9
11
39
1.75
6173--6499
171
1.9
171
82
7
414
34
11
14
40
1.81
6817--9113
171
13.5
169
68
7
622
33
11
11
38
1.78
6817--7300
170
2.8
169
75
8
532
35
12
10
38
1.78
6833--7576
341
2.2
338
83
1
907
35
12
9
38
1.76
6642--8318
170
9.9
167
67
8
506
33
11
11
38
1.78
7664--8276
340
1.8
328
79
8
689
33
10
13
39
1.79
10598--12015
341
4.1
341
78
6
1301
35
13
12
38
1.82
10598--12014
171
8.3
171
73
6
967
35
13
12
38
1.82
12619--13116
171
2.9
166
78
7
495
35
12
11
40
1.79

Tables:   1

The End!