Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398885.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2167.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7079

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
730--1737
171
5.9
170
76
7
803
35
12
12
39
1.81
730--1737
342
3.0
337
78
4
981
35
12
12
39
1.81
2077--3704
171
9.6
169
77
7
1386
36
14
11
37
1.83
2139--3704
340
4.6
340
79
6
1551
35
14
11
37
1.83
2169--3684
511
3.0
506
79
7
1493
36
14
11
38
1.82
4456--4794
171
2.0
170
81
2
394
40
10
12
36
1.77
5405--7079
341
4.9
336
77
7
1323
38
12
13
35
1.82
5402--7073
511
3.3
503
77
8
1565
38
12
13
35
1.82
5406--7079
171
9.8
170
77
8
1113
38
12
13
35
1.82

Tables:   1

The End!