Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397417.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2594.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21321

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--1848
171
10.8
171
74
7
1329
37
13
12
35
1.82
7--1848
341
5.4
340
79
5
1490
37
13
12
35
1.82
4605--7096
171
14.6
169
74
8
1669
39
12
12
35
1.81
4605--7096
341
7.3
340
76
8
1617
39
12
12
35
1.81
8439--9912
171
8.6
169
73
8
903
39
11
13
35
1.81
8440--9997
172
9.1
169
73
8
911
39
12
12
35
1.81
10187--10519
169
2.0
171
82
4
406
40
12
11
36
1.78
11004--13900
171
17.0
168
73
6
1807
37
12
13
35
1.82
11007--14067
341
9.0
340
75
6
1754
37
12
13
35
1.82
13340--13649
172
1.8
172
80
5
385
40
11
12
35
1.80
14788--15556
172
4.5
171
76
8
657
39
11
14
34
1.82
14968--15762
344
2.3
342
80
5
883
39
12
13
34
1.82
14798--15734
172
5.5
170
75
8
629
39
11
13
35
1.81
17779--21314
171
20.8
169
74
7
2122
39
12
12
35
1.81
17779--21314
341
10.4
340
75
7
2530
39
12
12
35
1.81

Tables:   1

The End!