Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398895.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2177.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4259

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--1664
171
9.7
169
81
5
1678
37
12
14
35
1.85
1--1664
512
3.3
508
80
4
1995
37
12
15
35
1.85
7--1664
682
2.4
680
81
4
1896
37
12
14
35
1.85
1768--3789
171
11.8
169
76
6
1464
35
14
12
37
1.84
1771--3734
342
5.7
340
77
5
1635
34
14
12
38
1.84
1874--3744
512
3.6
503
78
6
1567
34
14
12
38
1.84

Tables:   1

The End!