Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397421.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1491.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20952

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1047
171
6.2
171
74
9
602
35
12
10
39
1.79
1175--1961
170
4.6
169
78
5
640
34
14
11
38
1.82
1175--1967
340
2.3
344
79
6
860
34
14
11
38
1.82
2584--5033
171
14.4
170
75
6
1613
34
13
11
37
1.79
5414--6652
342
3.6
342
78
6
1170
35
14
11
38
1.82
5240--6681
172
8.4
170
78
5
1141
35
13
11
38
1.81
7986--14851
171
40.0
170
73
9
3434
34
13
11
38
1.81
9096--20951
341
34.7
340
69
9
3596
34
13
10
37
1.80
11474--11775
151
2.0
152
84
3
403
36
11
11
41
1.77
11626--20840
513
18.0
509
71
7
3516
34
13
10
36
1.79
15049--20950
171
34.5
170
71
7
2144
34
13
10
37
1.79

Tables:   1

The End!