Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398933.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2217.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11920

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4038--4529
170
2.9
172
78
7
450
35
13
11
39
1.81
4038--4529
171
2.9
171
79
6
464
35
13
11
39
1.81
4609--4924
171
1.9
161
81
5
307
37
15
8
36
1.78
5117--6251
171
6.6
169
79
7
1020
35
13
11
40
1.80
5062--6249
342
3.5
337
80
6
1227
35
13
11
39
1.81
5117--6250
513
2.2
509
81
6
1327
35
13
11
40
1.80
6814--10700
170
22.8
170
76
8
2927
38
11
13
35
1.80
11052--11381
172
2.0
157
75
13
283
36
12
13
33
1.82

Tables:   1

The End!