Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398941.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2223.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20139

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--660
171
3.9
169
72
5
463
33
12
11
39
1.79
927--1913
171
5.8
171
79
4
859
34
13
12
39
1.83
927--1913
342
2.9
339
77
4
996
34
13
12
39
1.83
927--1913
513
1.9
513
81
3
1191
34
13
12
39
1.83
2759--4284
171
8.9
170
80
6
1266
39
12
13
34
1.82
2759--4294
342
4.5
341
79
5
1482
39
12
13
34
1.82
2952--4294
513
2.6
509
83
3
1619
40
12
13
34
1.82
6625--7140
170
3.0
167
77
7
484
34
13
11
40
1.81
11449--11994
170
3.2
169
78
5
517
37
14
13
34
1.85
12135--12917
171
4.6
171
79
5
674
39
13
13
33
1.83
13272--15148
171
11.0
168
76
7
1457
40
12
12
33
1.81
13272--15148
342
5.5
340
79
7
1698
40
12
12
33
1.81
13272--15144
512
3.7
508
79
7
1773
40
12
12
34
1.81

Tables:   1

The End!