Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398945.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2227.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9697

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1384--1707
164
2.0
164
83
2
418
38
12
11
37
1.79
1076--2906
171
10.8
170
75
4
1073
35
12
10
36
1.78
1076--3205
342
6.3
331
71
9
998
35
12
10
37
1.78
3708--4126
172
2.4
170
85
4
556
41
9
11
36
1.75
4264--5536
171
7.5
170
81
4
1204
39
10
13
36
1.79
4264--5536
342
3.7
340
80
3
1357
39
10
13
36
1.79
5962--6593
343
1.9
331
80
6
730
37
13
10
36
1.79
5640--7506
171
10.9
170
75
4
1232
35
13
11
35
1.80
7913--9091
341
3.5
338
80
6
1166
35
13
11
37
1.82
7913--9091
171
6.9
169
78
6
1079
35
13
11
37
1.82
9237--9552
163
1.9
163
85
2
429
39
12
9
38
1.76

Tables:   1

The End!