Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397423.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_480.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20834

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4646--5085
170
2.6
171
84
2
519
37
12
13
36
1.83
4646--5110
171
2.7
170
81
3
416
36
13
13
35
1.85
6826--8917
171
12.3
171
77
5
1825
38
13
12
35
1.83
6826--9636
341
8.3
339
76
7
1734
37
13
13
35
1.83
8930--9636
171
4.1
170
79
2
779
37
13
13
35
1.84
9509--9767
126
2.0
125
82
3
313
42
10
13
34
1.78
9189--10103
468
2.0
468
83
3
1169
39
12
13
35
1.82
9637--10221
171
3.4
170
80
4
552
40
10
12
36
1.78
10921--15881
170
29.2
169
69
8
1528
36
12
12
34
1.81
10921--12931
511
4.0
505
79
6
1831
38
12
13
35
1.83
10921--12911
341
5.9
340
77
6
1422
38
12
13
35
1.83
12526--12813
157
1.8
157
81
1
362
38
11
11
38
1.78
13107--15554
341
7.2
340
71
8
857
37
12
12
34
1.81
16769--20834
170
23.9
170
74
7
2751
38
12
13
35
1.81
16860--20834
341
11.7
338
74
8
2058
38
12
13
35
1.81

Tables:   1

The End!