Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397425.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_637.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20560

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
629--1129
170
2.9
167
79
10
512
36
11
14
37
1.82
728--1203
171
2.8
169
80
4
494
37
11
13
36
1.82
3113--3428
171
1.8
171
81
4
395
36
14
12
36
1.84
3761--4164
171
2.4
169
80
7
449
40
11
13
34
1.81
4267--4778
170
3.0
170
84
3
645
38
12
13
34
1.83
7807--9988
171
12.8
169
79
4
2078
35
14
12
36
1.84
7807--9988
685
3.2
677
83
4
2508
35
14
12
36
1.84
10126--10795
171
3.9
170
81
3
704
35
15
13
35
1.86
11058--11761
171
4.1
171
73
6
456
34
14
12
36
1.84
11874--14404
171
14.8
170
80
5
2478
35
15
12
37
1.85
11854--14404
341
7.5
340
78
6
2427
35
15
12
37
1.85
15397--15912
165
3.0
167
77
7
547
34
15
13
34
1.86
16247--16592
171
2.0
171
80
2
390
34
14
11
36
1.81
16778--17343
171
3.3
170
74
3
451
33
13
13
34
1.85
19491--19800
171
1.8
172
82
3
401
38
13
12
34
1.84
19880--20560
171
4.0
171
78
3
672
34
12
16
32
1.87

Tables:   1

The End!