Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018398977.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2259.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11528

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1443--2916
513
2.9
506
77
6
1297
35
13
11
36
1.81
1173--2918
171
10.2
169
72
9
1116
35
12
11
37
1.80
1181--2918
342
5.1
338
78
5
1338
35
12
11
37
1.80
3294--3958
334
2.0
325
81
7
757
36
13
12
34
1.82
3159--4128
171
5.8
169
74
8
458
35
14
12
35
1.84
4554--6130
171
9.2
169
78
7
1339
35
12
13
38
1.83
6237--7961
171
10.2
171
76
6
1009
37
11
12
36
1.79
6646--7272
341
1.9
333
81
7
702
38
13
11
34
1.81
6234--8110
338
5.5
338
76
6
1433
37
11
12
36
1.80
8952--9901
342
2.8
338
83
3
1172
38
10
13
37
1.80
8952--9898
170
5.5
169
77
6
863
37
10
13
37
1.80
10159--11247
172
6.4
172
70
6
641
37
11
13
34
1.81
10631--11334
344
2.0
343
83
2
892
39
10
13
34
1.80

Tables:   1

The End!