Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399021.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_23.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15134

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20--342
169
1.9
170
81
9
381
38
9
13
34
1.79
692--1023
172
2.0
162
82
3
321
37
10
13
35
1.79
466--1073
170
3.5
166
77
5
538
36
10
14
36
1.80
1327--2590
172
7.4
171
73
7
682
38
12
12
35
1.81
1329--2562
515
2.4
509
81
4
1447
38
12
12
35
1.81
2810--4150
171
7.9
170
77
7
1022
38
11
14
35
1.82
2810--4150
342
3.9
338
77
7
1226
38
11
14
35
1.82
4068--4245
95
1.9
95
82
2
223
43
10
17
28
1.82
3717--4585
435
2.0
435
83
3
1095
39
10
15
34
1.82
4152--11216
171
41.4
171
75
5
5029
38
11
13
35
1.81
4157--11209
341
20.7
340
75
6
4797
38
11
13
35
1.81
13299--14716
171
8.3
171
80
4
1414
37
12
14
35
1.84
13306--14488
507
2.3
510
82
5
1417
37
12
14
35
1.84

Tables:   1

The End!