Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397431.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1080.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18860

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--5396
171
31.5
171
75
7
3806
35
13
11
38
1.82
5567--6441
170
5.1
169
79
5
933
35
12
12
39
1.81
5567--6441
341
2.6
339
85
5
1149
35
12
12
39
1.81
7195--7354
76
2.1
76
86
4
216
39
8
13
38
1.75
13591--14495
172
5.3
171
79
3
940
38
12
15
33
1.85
13591--14490
343
2.6
343
88
0
1280
38
12
15
33
1.85

Tables:   1

The End!