Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397433.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_331.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18644

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2705
171
15.8
171
74
5
1804
34
13
11
36
1.81
1--2670
514
5.2
511
78
4
1944
34
13
11
37
1.81
1--2696
858
3.1
855
77
5
2021
34
13
11
36
1.81
5190--6212
172
6.0
170
76
5
850
37
15
9
37
1.79
5198--6212
343
3.0
341
77
6
1016
37
15
9
37
1.79
6517--10509
171
23.4
170
79
5
3417
36
13
11
38
1.81
6517--10509
341
11.7
338
77
7
3250
36
13
11
38
1.81
6517--10509
511
7.8
510
78
6
3578
36
13
11
38
1.81
11162--11506
174
2.0
170
81
2
404
35
13
10
37
1.80
12411--13462
171
6.1
170
81
4
1055
39
10
14
34
1.82
15224--16849
173
9.5
170
75
8
577
40
11
12
35
1.79
15118--16961
170
10.8
170
75
9
1228
40
11
12
35
1.80
16047--16961
506
1.8
510
82
4
1179
41
12
12
34
1.80

Tables:   1

The End!