Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399060.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2335.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17508

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6804--7572
171
4.5
169
78
3
762
37
13
13
34
1.84
7943--8478
171
3.1
169
81
5
535
38
13
12
35
1.83
9913--10296
171
2.2
169
80
6
443
35
13
11
39
1.82
10591--12120
171
9.0
171
77
7
1317
36
11
11
39
1.79
10590--12127
341
4.5
336
75
9
1126
36
11
11
39
1.79
12470--13506
171
6.1
170
76
7
811
38
11
13
36
1.81
12840--13506
341
2.0
338
80
7
760
37
11
14
36
1.82
15491--15865
170
2.2
170
80
0
410
34
12
11
42
1.78

Tables:   1

The End!