Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399062.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2337.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13440

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2411--2740
171
1.9
172
81
6
393
37
14
11
36
1.82
3196--3616
171
2.5
171
76
10
416
35
14
11
38
1.82
4699--6674
172
11.5
173
77
6
1586
37
14
11
36
1.82
4705--6674
344
5.7
342
79
5
2031
37
14
11
36
1.82
4699--6673
516
3.8
513
77
7
1752
37
14
11
36
1.82
6775--8264
172
8.7
171
78
6
1213
37
11
14
36
1.82
6775--8261
344
4.3
340
77
7
1340
37
11
14
37
1.82
6775--8264
517
2.9
507
75
7
1326
37
11
14
36
1.82

Tables:   1

The End!