Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399065.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_234.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18099

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2924--3288
172
2.1
171
82
1
453
36
16
11
35
1.84
5090--5422
171
2.0
161
78
12
338
35
11
12
38
1.79
13131--13552
173
2.5
163
79
6
360
37
10
13
34
1.79
13194--13659
171
2.7
166
80
8
468
38
10
13
35
1.79
13902--15325
171
8.3
171
81
3
1520
38
12
13
35
1.83
13902--15314
343
4.1
342
81
4
1520
38
12
13
35
1.83
13920--16667
514
5.4
511
81
5
2888
38
12
13
35
1.83
15324--16667
343
3.9
343
80
5
1434
38
12
13
35
1.83
15324--16710
172
8.1
171
80
4
1404
38
12
13
35
1.82
16829--17695
171
5.1
170
80
5
838
38
12
14
34
1.84
16786--17695
342
2.7
339
81
5
965
37
13
14
35
1.85

Tables:   1

The End!