Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399070.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2345.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5530

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1236
169
7.3
167
78
6
1130
35
12
12
39
1.81
2--1239
338
3.7
337
80
5
1302
35
11
12
39
1.81
1266--1842
169
3.4
168
78
4
464
33
14
11
39
1.83
1266--2010
170
4.4
168
76
4
584
33
13
12
40
1.83
2247--2493
121
2.0
123
85
6
333
33
10
10
45
1.73
2370--3922
171
9.1
171
79
4
1415
35
13
12
39
1.82

Tables:   1

The End!