Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399078.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2352.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15170

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
568--2133
171
9.2
171
76
4
1241
36
11
13
35
1.81
569--2133
341
4.6
338
74
7
935
36
11
13
35
1.81
2235--3938
171
10.0
170
76
5
1292
36
13
12
37
1.83
2296--3931
341
4.8
342
75
6
1233
36
13
12
37
1.83
4055--4453
169
2.3
171
81
5
463
35
15
10
38
1.82
4761--5862
171
6.5
171
76
3
804
34
12
10
38
1.79
4935--5852
343
2.7
332
76
7
688
34
12
10
38
1.78
6383--6850
171
2.8
169
81
6
538
38
11
9
40
1.74
6937--11033
171
24.1
169
72
6
1644
34
12
11
35
1.80
6937--11033
341
12.0
339
73
4
1634
34
12
11
35
1.80
11692--12554
341
2.5
339
76
4
795
36
13
10
36
1.79
11901--12553
170
3.9
161
76
10
456
36
13
10
36
1.79
13033--13698
171
3.9
170
74
4
543
34
14
12
34
1.84
13899--14224
160
2.0
160
80
6
367
35
13
11
39
1.81

Tables:   1

The End!