Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397438.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3049.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18060

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--944
172
5.5
172
83
4
1080
37
11
13
37
1.82
1272--2842
171
9.2
170
81
4
1627
38
13
13
34
1.83
2947--3999
171
6.2
167
78
6
888
36
11
12
39
1.79
2947--4017
342
3.1
336
79
6
1102
36
11
12
39
1.79
4535--8591
171
23.7
167
75
9
979
38
12
13
35
1.82
4534--8683
342
12.1
342
79
4
3611
38
12
12
35
1.82
4537--8683
513
8.1
513
79
4
3697
38
12
12
35
1.82
10184--16782
171
38.6
171
79
3
5964
35
13
12
37
1.82
10184--16782
514
12.9
509
78
5
5610
35
13
12
37
1.82
16965--17423
171
2.7
171
83
2
571
36
12
13
37
1.83
17348--17498
75
2.0
75
94
0
266
45
10
15
29
1.79
17423--18060
170
3.8
170
80
4
696
36
13
12
36
1.84
17007--17792
417
1.9
415
81
3
961
37
12
13
36
1.83

Tables:   1

The End!