Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399111.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2387.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10352

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--2280
343
6.6
341
76
8
1877
35
15
12
36
1.85
3--2286
172
13.2
169
74
8
1597
35
15
12
36
1.85
998--1056
21
2.8
21
94
0
100
42
15
13
28
1.85
826--1227
193
2.1
193
84
1
529
36
15
13
35
1.86
331--2248
708
2.7
707
81
6
1923
35
15
13
36
1.86
2398--3946
171
9.0
169
76
6
1260
36
12
14
35
1.85
2482--3946
343
4.3
340
82
4
1379
35
13
14
36
1.85
2402--3845
514
2.8
511
81
5
1513
36
13
14
35
1.85
9572--10352
172
4.5
172
80
5
828
35
13
13
36
1.85
10172--10211
21
1.9
21
94
0
71
40
12
20
27
1.88
9627--10340
344
2.1
343
84
4
938
35
14
13
36
1.85

Tables:   1

The End!