Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397441.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1000.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17866

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
288--6268
171
35.0
170
76
6
3804
38
13
13
34
1.83
243--6249
341
17.6
341
77
5
4660
38
13
13
34
1.83
6213--6318
49
2.1
50
92
1
187
31
10
16
42
1.81
6045--6462
220
1.9
217
80
4
482
37
12
14
35
1.84
6262--6654
171
2.3
171
83
0
489
37
12
15
34
1.85
7392--17861
342
30.8
338
75
8
5240
38
12
13
35
1.83
7392--17805
513
20.4
511
77
7
7641
38
13
13
35
1.83
7392--10242
171
16.7
171
78
5
2388
38
12
13
35
1.83
10243--17805
171
44.3
170
79
4
6373
38
13
13
35
1.83

Tables:   1

The End!