Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399140.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2415.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6990

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--1208
171
7.0
170
78
5
1067
37
13
14
35
1.84
12--1208
343
3.5
334
79
6
1166
37
13
14
35
1.84
12--1208
514
2.3
514
81
5
1271
37
13
14
35
1.84
2221--4649
170
14.3
170
78
6
2135
35
14
12
37
1.84
2221--6988
512
9.4
511
73
10
3109
35
14
12
37
1.84
4893--4998
52
2.0
52
98
0
203
29
23
14
33
1.94
5182--6988
171
10.6
171
80
3
1696
35
13
13
38
1.84
5182--6988
683
2.6
676
81
5
1966
35
13
13
38
1.84
6862--6911
22
2.4
22
90
6
77
44
0
4
52
1.20

Tables:   1

The End!