Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397442.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3643.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17854

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
550--1171
170
3.7
170
74
5
459
36
13
11
34
1.82
513--1171
341
2.0
331
80
4
675
36
13
11
35
1.81
1413--4840
171
20.0
171
72
7
1237
34
13
11
35
1.81
2591--4728
171
12.5
169
75
6
1271
35
13
11
37
1.81
2591--4722
341
6.3
341
73
6
1493
35
13
11
37
1.81
2738--3963
681
1.8
671
80
5
1418
35
13
11
37
1.82
5929--6513
171
3.5
168
78
4
590
37
11
14
35
1.81
6657--9807
171
18.6
170
74
6
2008
35
11
13
36
1.81
6657--17000
513
20.1
510
70
8
2932
36
11
13
35
1.81
10211--17332
171
41.7
170
75
4
4796
36
11
13
35
1.80
17364--17838
171
2.8
172
81
3
530
38
12
12
36
1.81

Tables:   1

The End!