Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397443.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1109.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17711

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2228--2616
171
2.3
172
82
6
441
37
12
15
35
1.85
3754--4531
170
4.6
168
75
4
576
37
11
14
33
1.81
3754--5586
172
10.9
167
71
9
609
37
12
13
34
1.82
6929--8205
341
3.7
340
80
5
1240
40
11
12
36
1.79
6826--8246
172
8.3
170
80
4
1313
40
11
13
35
1.80
11512--11912
171
2.3
171
78
3
405
40
11
11
33
1.78
15318--16143
173
4.8
171
72
8
541
34
15
10
36
1.82
16353--17711
343
4.0
338
78
7
1329
36
14
11
37
1.83
16353--17711
172
8.0
169
80
4
1394
36
14
11
37
1.83

Tables:   1

The End!