Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399161.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2433.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14375

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16--1159
341
3.3
340
79
2
1094
35
13
11
36
1.80
16--1160
171
6.7
171
77
2
1030
35
13
11
36
1.80
1332--3105
171
10.4
171
75
5
767
34
12
12
37
1.81
7128--7506
171
2.2
170
83
2
447
34
11
12
39
1.79
7651--8334
171
4.0
170
77
2
636
33
9
12
38
1.76
8621--9432
340
2.4
331
79
6
760
34
13
12
36
1.82
8435--9495
171
6.2
171
78
3
983
35
12
11
37
1.80
9805--11159
171
7.9
171
74
5
927
35
12
11
37
1.79
10288--10913
341
1.9
331
83
6
732
36
10
11
39
1.76
12372--12690
171
1.9
161
85
0
352
37
10
11
33
1.76
13702--14107
171
2.4
171
79
2
404
42
12
10
32
1.76

Tables:   1

The End!