Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397444.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1576.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17698

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--776
170
4.5
170
74
7
501
34
13
13
37
1.83
1063--6072
171
29.5
170
74
7
2998
35
13
11
39
1.81
4148--4192
22
2.0
22
82
0
54
37
0
6
55
1.26
6498--8071
171
9.2
168
74
7
1032
34
13
12
38
1.82
6484--7964
512
2.9
506
80
5
1448
34
13
12
39
1.81
8150--9124
171
5.7
170
77
5
809
35
13
10
37
1.80
10245--11276
171
6.1
171
74
5
876
35
13
11
37
1.81
10245--11276
342
3.0
334
75
5
986
35
13
11
37
1.81
11794--13028
171
7.2
168
71
9
564
33
12
12
39
1.82
11630--13028
342
4.1
340
75
7
962
33
12
12
38
1.81
13069--16072
171
17.6
170
77
6
2189
35
12
12
39
1.81
13674--14005
170
2.0
162
81
6
307
32
12
11
40
1.80
13085--16072
512
5.8
513
77
6
2261
35
12
12
39
1.81
16096--16590
171
2.9
171
81
3
532
32
13
12
41
1.82
15629--16538
466
2.0
467
80
8
1048
33
13
13
39
1.84

Tables:   1

The End!