Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397445.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1592.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17664

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1815--4142
171
13.7
170
80
5
2225
35
13
12
38
1.83
1815--4120
341
6.8
341
79
6
2060
34
13
12
38
1.83
3847--4142
156
1.9
158
81
4
366
36
12
14
37
1.83
5183--5241
21
2.7
22
79
10
59
61
0
33
5
1.18
5346--7618
171
13.3
170
76
4
1774
37
12
14
34
1.83
6263--6560
165
1.8
165
85
5
424
42
11
12
32
1.79
8458--8828
172
2.2
171
81
4
417
36
14
12
35
1.83
10853--13944
171
18.3
165
73
10
1608
38
12
13
34
1.83
10853--11457
170
3.5
170
77
5
524
37
12
14
34
1.85
11303--11594
150
1.9
150
88
2
435
40
13
13
33
1.83
10853--12784
664
2.9
663
89
1
2906
38
12
14
34
1.84
12115--13753
340
4.8
338
74
7
1247
38
12
12
34
1.82
15564--16921
171
7.9
168
78
8
972
38
13
13
34
1.84

Tables:   1

The End!