Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397446.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_485.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17658

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--366
171
2.1
173
80
6
413
33
14
12
39
1.83
860--3271
171
14.1
171
72
5
1120
34
13
11
36
1.82
860--11350
342
30.6
338
69
8
2149
34
13
12
37
1.82
858--11330
513
20.4
508
69
9
1863
34
13
12
37
1.82
3754--11346
171
44.7
171
71
6
2678
34
12
12
37
1.82
4653--5273
328
1.9
327
79
3
710
34
12
13
38
1.82
6032--8683
512
5.2
508
75
7
1392
34
13
12
37
1.83
11451--16612
171
30.5
169
72
8
2639
37
12
12
34
1.82
11451--16609
340
15.2
338
71
9
1483
37
12
12
34
1.82
12621--16612
340
11.8
334
72
8
1636
37
12
13
34
1.82
17238--17655
169
2.5
168
80
4
466
42
12
11
34
1.78

Tables:   1

The End!