Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399184.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2454.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16150

Tables:   1   

This is table  1  of  1  ( 21 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2248--2843
171
3.5
169
73
6
427
36
11
12
35
1.79
3179--3845
169
3.9
166
78
8
590
37
14
10
36
1.80
2951--3878
171
5.4
170
76
6
754
35
15
10
34
1.83
3141--3853
341
2.1
340
82
2
849
37
15
10
35
1.82
4124--5194
170
6.3
169
80
4
1078
36
15
12
35
1.85
4125--5191
341
3.1
339
82
3
1135
36
15
11
35
1.85
5079--5319
125
1.9
125
81
0
293
38
11
14
35
1.83
5302--6876
171
9.2
170
80
5
1547
36
14
12
35
1.84
5302--6876
681
2.3
682
80
5
1852
36
14
12
35
1.84
7509--8039
172
3.1
169
81
5
586
35
14
12
38
1.83
8451--10062
341
4.7
339
81
5
1811
35
15
12
36
1.84
8451--10062
170
9.5
170
80
4
1605
35
15
12
36
1.84
10691--12118
170
8.4
171
80
6
1328
35
11
16
36
1.85
10691--12118
171
8.4
170
79
6
1282
35
11
16
36
1.85
12428--13525
170
6.4
170
77
8
923
36
11
15
35
1.83
12880--13525
171
3.8
171
81
7
692
37
12
15
34
1.85
12880--13525
341
1.9
337
82
6
822
37
12
15
34
1.85
13652--14065
172
2.4
167
81
3
506
36
14
12
35
1.84
13591--14531
465
2.0
465
82
3
1142
36
13
14
35
1.85
13773--14362
297
2.0
294
83
3
736
34
13
15
35
1.87
14067--15423
171
7.9
170
79
4
1313
37
12
14
35
1.84

Tables:   1

The End!