Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397447.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3560.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17633

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--7355
171
43.0
172
72
6
3680
34
13
10
37
1.79
2358--2425
30
2.3
30
100
0
136
29
22
7
41
1.80
2493--6664
341
12.2
341
73
8
1193
35
13
11
37
1.80
2493--6664
854
4.9
845
74
7
2439
35
13
11
37
1.80
3755--5949
682
3.2
671
76
4
1384
34
13
11
37
1.82
2388--8073
683
8.4
672
73
8
2636
34
12
10
37
1.79
7405--7878
173
2.8
171
76
8
415
35
12
12
37
1.80
8513--12068
171
20.8
171
73
5
1980
35
13
10
37
1.79
11369--12038
341
2.0
332
80
5
683
34
11
11
39
1.78
13956--14549
170
3.5
169
78
3
600
36
12
9
37
1.77
15173--16109
171
5.5
169
75
4
680
35
12
10
38
1.79
15173--15821
342
1.9
342
80
3
761
34
13
11
38
1.81
17001--17368
171
2.1
170
84
3
472
35
12
14
38
1.83

Tables:   1

The End!