Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397448.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2482.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17603

Tables:   1   

This is table  1  of  1  ( 17 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1093--1465
170
2.2
171
77
3
412
36
13
8
38
1.75
2400--2671
150
1.8
148
81
9
338
37
14
11
36
1.83
2565--2872
169
1.9
159
83
5
327
35
16
10
35
1.83
3109--4328
170
7.2
170
75
5
741
37
10
13
34
1.79
8084--8395
170
1.9
160
80
12
353
37
10
14
34
1.80
7784--8408
340
1.8
335
83
3
760
38
10
12
34
1.78
8250--8576
172
2.0
157
82
7
295
37
9
13
34
1.78
7701--8408
340
2.1
334
80
7
751
39
10
13
34
1.78
9123--11016
172
11.1
169
72
7
1115
38
10
12
35
1.77
10454--10500
19
2.8
16
75
25
51
57
6
2
34
1.36
11418--12321
172
5.3
171
74
5
465
36
10
14
33
1.80
13433--14514
171
6.3
173
73
5
781
38
9
12
34
1.76
13439--14514
341
3.2
331
86
2
1032
38
9
12
34
1.76
15004--16465
170
8.6
171
76
3
1124
34
14
9
37
1.77
15004--16465
341
4.3
339
78
4
1219
34
14
9
37
1.77
15423--16465
511
2.0
510
80
4
1145
35
14
9
39
1.79
16787--17256
168
2.8
165
72
8
412
35
13
10
37
1.79

Tables:   1

The End!