Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399241.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2510.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3987

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1244--1287
22
2.0
22
81
0
52
36
0
4
59
1.18
1234--2253
511
2.0
508
83
4
1270
34
13
12
39
1.83
1234--3987
170
16.3
171
70
7
1280
33
12
12
38
1.81
2357--3987
171
9.6
168
75
8
1174
34
12
12
39
1.81
2356--3987
342
4.8
338
80
6
1683
34
12
12
39
1.81
2356--3987
670
2.4
672
82
6
1874
34
12
12
39
1.81

Tables:   1

The End!