Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397452.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2595.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17350

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151--485
171
2.0
161
74
12
341
37
9
14
35
1.79
923--2786
170
10.9
171
77
4
1517
37
11
12
35
1.79
3244--10178
171
40.7
170
74
6
4457
37
11
12
34
1.81
8160--8461
156
1.9
155
83
3
392
36
11
14
36
1.84
10914--11547
342
1.9
331
80
3
666
36
10
14
36
1.80
11592--11848
132
1.9
132
80
4
295
36
12
13
36
1.83
11705--12576
173
5.1
169
74
7
640
38
11
12
34
1.80
13490--13871
169
2.3
168
81
7
418
37
10
14
37
1.81
13817--14145
172
2.0
159
80
8
363
35
11
13
36
1.80
14028--14067
21
1.9
21
84
0
53
27
12
10
50
1.72
16007--17230
170
7.2
170
74
5
650
36
10
13
36
1.79
16007--17133
171
6.6
170
73
8
460
36
11
13
36
1.81

Tables:   1

The End!