Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397453.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2678.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16947

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1722--2875
514
2.2
511
78
6
1166
34
13
12
39
1.82
1722--2943
171
7.1
171
75
3
868
34
13
12
39
1.83
2474--3821
693
2.0
682
85
3
1811
32
13
12
37
1.83
6169--7582
339
4.2
343
73
10
801
34
14
11
39
1.82
4556--7590
170
17.7
170
71
8
992
34
13
12
38
1.81
4396--7796
509
6.6
509
70
9
1541
34
13
11
38
1.81
9024--11346
171
13.6
168
74
8
1045
40
12
12
34
1.81
10396--11172
343
2.3
341
79
4
796
41
13
11
33
1.81
8960--11455
513
4.9
513
75
8
1930
39
12
12
34
1.82
11994--13124
171
6.6
169
76
5
794
34
12
13
39
1.82
11994--13124
170
6.6
171
76
6
659
34
12
13
39
1.82
13422--13775
170
2.1
170
81
6
405
35
14
11
38
1.83
14063--14833
171
4.5
172
74
8
444
35
14
11
39
1.82
15015--16909
171
11.1
170
73
10
1030
35
13
12
39
1.82

Tables:   1

The End!