Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397454.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1464.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16666

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1822--3111
171
7.6
171
75
8
709
37
11
13
35
1.81
1819--3105
342
3.8
341
75
9
1010
36
11
13
35
1.81
4070--5302
171
7.2
171
78
5
1098
35
13
13
38
1.83
4071--5285
513
2.4
515
80
5
1276
35
13
13
38
1.83
5547--5860
172
1.8
171
87
2
468
35
12
12
40
1.81
8104--13906
171
34.0
170
75
6
3734
35
13
11
37
1.81
8104--13906
343
17.0
341
75
5
3876
35
13
11
37
1.81
14653--15418
171
4.5
167
76
6
601
36
13
10
38
1.79
14653--15422
341
2.3
341
79
4
836
36
13
10
38
1.79
15586--16666
171
6.2
171
71
10
716
35
14
13
37
1.85
16021--16073
21
2.5
21
96
0
97
39
18
20
20
1.92
15586--16584
535
1.9
535
89
1
1581
35
14
13
37
1.84
15731--16392
364
1.8
363
81
2
828
35
14
13
37
1.85

Tables:   1

The End!