Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397455.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_510.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16594

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1000--1991
171
5.8
170
73
4
669
35
12
10
37
1.79
3148--5152
170
11.7
171
79
3
1838
38
12
12
36
1.81
3148--5152
341
5.9
340
80
5
1839
38
12
12
36
1.81
5751--6233
171
2.8
169
75
6
429
37
12
12
38
1.81
11002--12465
171
8.6
171
80
5
1487
39
12
12
35
1.81
12063--12952
480
1.9
479
79
7
1025
39
12
11
36
1.79
12511--13393
171
5.2
169
79
4
907
38
11
12
37
1.79
12519--13395
342
2.6
340
84
2
1098
38
11
12
37
1.79
13349--13446
48
2.0
48
100
0
196
18
18
15
47
1.82
13446--14000
172
3.2
168
79
6
607
39
11
13
35
1.81
13397--13999
170
3.5
171
78
6
632
37
12
13
36
1.82
12912--13938
561
1.8
560
80
5
1232
37
12
13
36
1.81
14202--14625
171
2.5
170
76
5
449
36
15
10
37
1.82

Tables:   1

The End!