Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397456.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_974.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16585

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
606--936
171
1.9
170
84
5
436
34
12
13
38
1.83
1468--6401
171
28.9
170
71
7
1578
33
12
11
38
1.80
1461--3732
170
13.3
169
70
7
685
33
12
11
38
1.80
3814--6401
171
15.1
171
79
6
1901
34
13
12
39
1.81
3814--6401
344
7.6
343
79
5
2026
34
13
12
39
1.81
3814--6235
515
4.7
515
76
8
1484
34
13
12
39
1.81
9127--14366
171
30.3
171
73
8
3084
33
13
12
39
1.82
9146--14363
686
7.5
688
76
7
4080
33
13
12
39
1.82
9143--14366
515
10.1
510
75
8
3407
33
13
12
39
1.82
12987--14242
170
7.3
170
72
10
600
33
12
11
40
1.79

Tables:   1

The End!