Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399293.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2561.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7548

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
646--2078
171
8.3
170
75
9
934
33
14
12
38
1.85
1272--1335
21
3.0
21
88
4
76
45
20
17
17
1.86
1363--2078
170
4.2
169
80
5
667
33
14
12
39
1.83
647--2078
363
4.1
341
76
8
941
34
14
12
38
1.84
2970--3291
171
1.9
159
84
6
346
33
12
14
36
1.84
5865--6486
171
3.6
172
79
5
480
35
14
12
36
1.83
5261--6486
342
3.6
341
74
6
800
34
15
11
35
1.83

Tables:   1

The End!