Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397459.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_494.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16488

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--837
171
4.9
170
77
4
685
37
11
12
35
1.80
117--837
341
2.1
332
78
7
696
37
12
12
34
1.80
940--5526
171
26.6
170
73
10
2495
34
13
13
37
1.83
940--5526
513
8.9
510
74
10
3136
34
13
13
37
1.83
1360--5526
514
8.0
508
74
11
2763
33
13
13
38
1.84
6115--6965
171
5.0
170
76
4
651
34
13
11
36
1.81
7599--8751
171
6.7
169
73
4
823
34
13
11
35
1.82
8861--10975
171
12.4
169
70
4
877
34
12
13
33
1.82
11075--11502
169
2.5
170
84
3
538
39
11
14
35
1.82
12909--14459
171
9.1
171
77
4
1321
36
12
13
36
1.81
12459--14265
851
2.1
841
81
4
2006
36
12
13
36
1.82
12332--14462
341
6.3
340
77
4
1798
36
11
12
36
1.81
12332--14459
171
12.5
170
76
5
1283
36
11
13
36
1.81
15398--16486
171
6.4
171
75
2
707
36
11
12
35
1.79

Tables:   1

The End!