Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399318.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2586.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4137

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
536--1548
170
5.9
168
75
7
769
35
13
10
37
1.79
536--1548
341
3.0
332
80
7
980
35
13
10
37
1.79
536--1540
171
5.9
170
75
7
743
35
12
10
37
1.79
1651--2277
170
3.7
169
78
6
606
35
13
11
36
1.82
2577--4134
170
9.2
168
79
6
1527
35
14
12
37
1.83
1665--4134
340
7.3
335
74
6
1662
34
14
11
36
1.83
2448--4034
848
1.9
848
82
5
1995
35
14
12
37
1.83

Tables:   1

The End!