Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397460.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1507.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16463

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
298--344
23
2.0
23
95
0
85
51
4
12
31
1.59
137--506
194
1.9
193
85
1
508
40
12
11
35
1.80
328--8130
171
45.5
170
73
9
2341
38
12
13
34
1.83
321--8134
341
22.8
340
74
8
5060
38
12
13
34
1.83
3296--3344
20
2.5
20
82
0
62
18
22
22
36
1.95
8410--8550
73
1.9
73
86
0
201
36
17
18
27
1.93
8414--8574
73
2.2
73
80
2
189
37
16
19
26
1.93
9428--11577
171
12.6
170
77
7
1758
38
13
12
34
1.82
9428--11572
341
6.3
340
77
6
1812
39
13
12
34
1.82
13097--13183
36
2.4
36
92
1
140
35
9
10
44
1.70
14122--14609
169
2.9
167
79
4
417
39
11
12
36
1.80
14222--14609
169
2.3
168
82
4
442
39
11
13
35
1.81
14068--15277
170
7.2
169
74
6
675
38
12
13
34
1.81
15595--16307
171
4.2
170
75
5
571
38
12
12
34
1.81

Tables:   1

The End!