Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397461.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_966.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16465

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
139--604
172
2.7
170
82
4
526
38
12
14
34
1.84
1500--5296
171
22.2
171
72
6
1147
36
11
13
34
1.81
4162--4492
170
2.0
159
73
15
310
39
12
11
33
1.79
6064--8295
171
13.1
171
77
5
1960
39
11
13
35
1.81
8168--8418
138
1.8
138
79
8
296
34
12
16
36
1.87
8504--8544
21
2.0
21
90
4
66
24
12
19
43
1.85
8297--9308
171
5.9
170
77
7
827
39
13
13
34
1.83
7309--9287
992
2.0
991
80
5
2273
39
12
13
34
1.82
9462--11841
171
13.9
171
75
5
1497
37
12
13
33
1.83
9462--11271
341
5.3
341
75
6
1053
37
12
14
33
1.84
9980--11313
512
2.6
510
79
5
1379
38
12
13
34
1.83
12949--13726
170
4.6
169
75
6
626
37
12
15
34
1.85
15034--16465
171
8.4
171
80
5
1419
38
12
13
35
1.82

Tables:   1

The End!