Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399349.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2617.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9570

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2768--3075
170
1.9
155
82
5
271
37
10
12
35
1.77
2927--3248
170
2.0
160
80
12
359
37
9
13
36
1.78
2230--3282
171
6.2
169
73
6
427
35
9
13
33
1.78
5326--5379
16
3.2
16
75
12
54
29
5
5
59
1.43
5077--5560
169
2.8
169
83
5
559
38
13
8
38
1.76
5568--6448
171
5.2
170
72
5
494
36
13
10
36
1.79
5978--6961
507
2.0
477
80
3
868
35
11
9
36
1.75
5831--7993
171
12.8
169
72
7
975
35
12
9
37
1.77
6485--7982
673
2.2
667
82
5
1726
35
12
9
37
1.76
8938--9422
171
2.8
170
78
4
478
34
14
11
38
1.81

Tables:   1

The End!