Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397463.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1316.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15659

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
515--2088
171
9.2
170
74
5
1170
34
13
12
38
1.81
516--2086
512
3.1
508
78
4
1383
34
13
12
38
1.81
515--2088
341
4.6
339
77
4
1276
34
13
12
38
1.81
2527--3279
170
4.4
169
77
4
629
34
12
12
39
1.81
5738--6664
171
5.4
171
77
7
776
33
12
12
41
1.81
5668--6664
342
2.9
337
76
8
976
33
12
13
40
1.82
7407--7715
171
1.8
171
81
6
394
36
10
13
39
1.79
8103--9474
171
8.1
165
72
8
659
35
13
11
38
1.81
9519--9561
22
1.9
23
85
4
61
37
0
6
55
1.27
10512--13309
171
16.5
170
73
8
1347
35
12
11
39
1.80
11045--11093
22
2.3
22
82
3
64
40
0
4
55
1.19
10512--15646
340
15.1
339
73
8
2788
35
13
11
38
1.80
12743--12787
22
2.0
22
83
8
56
40
0
4
55
1.20
13329--15646
171
13.5
171
73
6
1375
34
13
11
36
1.81

Tables:   1

The End!