Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397466.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1006.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15228

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2012
170
11.7
168
71
9
1050
35
13
10
37
1.79
459--824
184
2.0
185
92
2
610
36
13
12
37
1.83
643--2012
171
8.0
171
72
7
894
35
13
10
37
1.80
4893--5625
171
4.3
170
72
5
492
37
10
13
34
1.79
6062--7288
340
3.6
333
77
3
945
35
10
14
34
1.80
6062--7294
170
7.3
167
71
5
783
35
10
14
34
1.80
10138--10895
170
4.5
168
72
6
476
37
9
15
33
1.80
12795--12852
23
2.6
22
86
5
73
25
13
25
34
1.93
14617--15224
171
3.6
168
73
4
500
36
13
9
35
1.77

Tables:   1

The End!