Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018399389.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2655.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15009

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1726--2452
172
4.2
169
77
6
473
35
13
12
35
1.82
3774--4107
172
2.0
162
84
3
359
34
12
12
37
1.80
5534--6212
171
4.0
169
75
5
562
36
12
11
38
1.80
6821--7232
171
2.4
170
81
5
454
37
12
12
34
1.81
7552--7918
171
2.1
171
80
4
409
37
11
11
39
1.78
7558--8012
171
2.7
170
78
4
407
37
12
12
37
1.81
10614--11010
172
2.3
170
82
4
467
37
14
12
36
1.84
10615--13149
171
14.9
172
72
8
771
34
11
12
38
1.80
11139--11454
169
1.9
170
81
5
388
36
12
11
40
1.78
11300--11608
152
2.0
152
86
3
435
34
11
12
41
1.80
11972--13185
172
7.1
171
73
7
476
34
11
12
39
1.79
12011--13180
343
3.4
342
75
6
875
35
11
12
39
1.78
11451--13186
171
10.1
172
73
5
796
34
11
12
38
1.80
13276--13952
172
3.9
169
80
4
707
35
13
12
38
1.82
13276--13956
343
2.0
343
83
4
854
35
13
12
38
1.82
14641--15007
171
2.2
170
76
5
393
32
14
11
38
1.82

Tables:   1

The End!