Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397467.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2613.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14937

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
112--3396
171
19.2
170
72
5
1755
37
10
13
34
1.80
3432--3481
21
2.4
21
96
0
91
12
30
4
54
1.55
5154--5633
170
2.8
170
85
1
629
39
11
13
35
1.81
6809--7389
171
3.4
168
77
4
558
35
12
14
35
1.84
7500--8428
169
5.5
171
74
7
642
38
10
13
35
1.79
8520--8847
171
2.0
163
83
4
356
38
10
12
35
1.78
9083--14352
171
30.9
171
76
5
3777
33
13
12
38
1.83
9083--14352
512
10.3
512
75
6
3769
33
13
12
38
1.83
9083--14213
683
7.5
677
76
7
3612
33
13
12
38
1.83
9083--14083
854
5.9
847
77
6
3594
33
13
13
38
1.83

Tables:   1

The End!